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Leveling up mouse model analysis

Organoids complement mice as new approach methodologies gain focus

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Composite image of organoids, microscope and culture wells.

Organoids are one new approach methodology (NAMs) scientists can leverage alongside mouse models to better explore research questions. Photo illustration by Evan Johnson, Division of Research

By Sophie Rentschler | MU Division of Research

Culture dishes in Andrew Kelleher’s lab contain small, dome-like droplets where uterine cells grow that more closely organize and function like native tissue than traditional cell cultures. Dubbed organoids, Kelleher uses the 3D cell models to simulate the human cellular system he studies. 

“These systems allow us to use patient-derived cells to ask relevant research questions,” Kelleher said. “We believe that implementation of these models will help us be at the intersection of discovery and clinical translation.”

This system is just one new approach methodology (NAMs), and the National Institutes of Health (NIH) is encouraging researchers to integrate these models in their work. 

Andrew Kelleher looks at microscopic organoids on screen.

Andrew Kelleher looks at his organoids under the microscope. This model allows him to use patient-derived cells to ask relevant research questions about the human reproductive system. Photo by Ben Stewart | NextGen Precision Medicine

Kelleher’s use of organoids allow for dissection of different molecular mechanisms at the physiological level without relying as heavily on animal models for preliminary analysis. NAMs approaches guide his lab to better identify next steps for their experiments.

Coined in a European Chemicals Agency workshop in 2016, NAMs add possibilities, and literature from the meeting states that “animal testing and the NAMs will be complementary and not necessarily competing approaches.” 

In April 2025, NIH announced it is “prioritizing human-focused research and reducing animal use in research” in certain parts of the research process like “revealing basic mechanisms in complex systems, refining hypotheses and allowing scaling with respect to input variables.” That guidance gained teeth in July, when the federal agency stated it will prioritize grant applications that utilize these approaches, which includes NAMs.

“NAMs can be incredibly exciting because they offer powerful avenues to address scientific research problems, allowing us to model complex human biology,” Mizzou Associate Vice Chancellor of Research Chris Lorson said. 

Organoids on screen

Organoids are viewed by a Kelleher lab member on screen under the microscope. They are propagated in the wells of this culture plate from patient-derived uterine cells. Photo by Ben Stewart | NextGen Precision Medicine

Kelleher’s organoid NAMs are an advanced in vitro system, an experiment performed outside of a living organism in a dish or test tube, that enables extended propagation of primary uterine cells. After the cultures expand within extracellular matrix droplets, they’re biobanked or preserved in ultra-low temperatures, allowing them to be stored long term and distributed to collaborators across the country. 

He added once the cells are thawed out, they can be refreshed with new media and survive for long periods of time. 

“This allows for consented patient samples to go much further in the research community,” Kelleher said. 

Three prominent types of NAMs — organoids, computational models and microphysical systems — offer options for a variety of research.

While organoids have been effective in answering Kelleher’s early research questions, the questions still need animal models or human clinical trials to confirm results. Even development of the organoid models needs further assessment using animal cells. This is to preserve “precious human samples” in troubleshooting new cell culture models, Kelleher said.

“I think these models are extremely useful,” Kelleher said about NAMs. “But I do think it’s premature to say that they will bypass animal models; the complexity of the 3D organoid models is not at the complexity of an organism.”

Daniel Davis, co-director of the Animal Modeling Core at Mizzou, utilizes another type of NAM called induced pluripotent stem cells (iPSCs), as well as humanized mouse models to study diseases and test therapeutics. 

With the use of skin or blood samples, researchers like Davis reprogram cells into pluripotent stem cells — cells which can be morphed into any cell type in the body. 

“Researchers in our team treat those iPSCs with specific reagents to turn them into whatever type of cell we want,” Davis said. “They can be turned into heart cells, muscle cells, brain cells, virtually any cell type relevant to the disease we are studying.”

Davis is part of a team that uses iPSCs to study a rare neurological disease, Baker-Gordon Syndrome, and collects skin or blood samples from patients affected by the disease. The cells from these samples are later converted into iPSCs, which can then be turned into a model of the patient’s neurons, cells in the central nervous system that control human functions like movement and thought. 

“We turn iPSCs into neurons so that we can study patient cells that are relevant to the disease we are working on and it is too invasive to go into a patient’s brain and take their neurons out directly.” Davis said. 

Davis added that his team tests therapies to treat patients with Baker-Gordon Syndrome on the iPSCs-turned-neurons, but determining the success of treatment for the disease doesn’t stop at NAMs. 

Genetically engineered mouse models with human patient mutations, and what Davis calls a “patient avatar,” are then used to further vet the safety and effectiveness of therapies for human use. 

“A lot of human genes are 99% conserved in mice, so it’s very easy to recapitulate most of the human diseases in the mouse model,” Davis said. 

iPSC-converted neurons in a dish don’t interact with other cells that would also be in the brain, and Davis said this is why further testing with mouse models is important to see how the therapies respond on a system-level within a living organism. 

“When you’re testing a drug, you shouldn’t be testing it in only a mouse model, and you shouldn’t solely be testing it in a NAM,” Davis said. 

He added that researchers should test their therapies across multiple avenues to reap the benefits of each system. This approach to answering preliminary research questions yields “more promising and translatable data to move into clinical trials with.” 

Scientists who have primarily focused on animal models might feel a degree of apprehension when asked to move towards new methodologies, but Lorson sees various NAMs as an opportunity.

“NAMs are not about abandoning our core research questions, rather we are simply upgrading some of the tools we use to answer them,” Lorson said. 

That upgrade effectively reduces the time it takes to go from an initial research discovery to its clinical application and allows for precision medicine approaches across Kelleher’s research. 

Invariably, these methods will continue to get more complex and better simulate human physiology with the creation of models made for more human cell types, like mesenchymal stromal cells and immune cells.

“I think the innovation is going to continue,” Kelleher said. “Because everyone always wants to build better model systems.”

Have you used an interesting NAMs approach in your lab? Share your experience with our communications team by emailing muresearch@missouri.edu.